Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
6
ATAC-seq
6
WGBS
3
small RNA-seq
2
pCHi-C
1
DNase-seq
1
RNA microarray
Assay category
401
Transcription
DNA binding
7
DNA accessibility
6
DNA methylation
Date released
386
February, 2021
12
July, 2019
7
August, 2017
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
405
bigWig
404
bam
401
tsv
6
fastq
5
bed narrowPeak
3
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
Organism
416
Homo sapiens
Biosample type
414
tissue
2
primary cell
1
in vitro differentiated cells
Organ
721
pancreas
530
connective tissue
417
adipose tissue
395
epithelium
302
kidney
259
heart
235
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
66
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
vein
2
intestine
2
pericardium
2
spleen
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
417
AMP
Genome assembly (visualization)
406
hg19
405
GRCh38
Lab
417
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
November, 2018
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
417 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
WGBS
small RNA-seq
pCHi-C
DNase-seq
RNA microarray
tissue
adipose tissue
382
3
3
1
subcutaneous adipose tissue
7
1
1
1
omental fat pad
5
1
1
1
subcutaneous abdominal adipose tissue
3
visceral abdominal adipose tissue
3
+ See 1 more…
primary cell
mesenchymal stem cell of adipose
1
1
in vitro differentiated cells
white fat cell
1
See all biosamples
Download