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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ATAC-seq
4
Hi-C
1
DNase-seq
Assay category
198
DNA binding
138
Transcription
43
DNA accessibility
4
3D chromatin structure
Date released
12
August, 2021
12
February, 2023
6
October, 2019
5
May, 2021
5
November, 2019
4
February, 2021
2
March, 2020
1
August, 2017
Available data
22
bed narrowPeak
18
bam
13
bigWig
7
bed bedgraph
5
bed bed3
4
bed bed3+
4
bedpe bed3+
4
hic
3
bigBed narrowPeak
3
txt
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
47
Homo sapiens
Biosample type
476
tissue
298
primary cell
47
in vitro differentiated cells
35
cell line
Organ
18
connective tissue
Project
47
AMP
Genome assembly (visualization)
47
hg19
18
GRCh38
Lab
37
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
14
inconsistent ontology term
month_released!
November, 2018
BIOSAMPLE
ASSAY
47 results
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ATAC-seq
Hi-C
DNase-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
8
1
embryonic stem cell
6
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
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