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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
WGBS
19
RRBS
1
DNAme array
Assay category
1778
Transcription
1702
DNA binding
776
DNA accessibility
88
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
25
July, 2019
15
August, 2017
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
27
bed bedMethyl
27
bigBed bedMethyl
14
fastq
11
bam
10
bigWig
6
tsv
Organism
88
Homo sapiens
Biosample type
56
primary cell
32
tissue
Organ
52
epithelium
49
pancreas
9
heart
6
adipose tissue
6
connective tissue
6
liver
6
musculature of body
3
kidney
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
47
HPAP
41
AMP
Genome assembly (visualization)
17
hg19
10
GRCh38
Lab
47
Klaus Kaestner, Upenn
41
AMP-T2D consortium
Audit category:
inconsistent ontology term
month_released!
November, 2018
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
88 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
+ See 6 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 11 more…
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