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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
WGBS
21
RRBS
1
DNAme array
Assay category
1688
DNA binding
1516
Transcription
815
DNA accessibility
84
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
27
July, 2019
9
August, 2017
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
27
bed bedMethyl
27
bigBed bedMethyl
11
fastq
9
bam
8
bigWig
6
tsv
Organism
84
Homo sapiens
Biosample type
58
primary cell
26
tissue
Organ
53
epithelium
49
pancreas
10
heart
7
connective tissue
adipose tissue
6
liver
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
47
HPAP
37
AMP
Genome assembly (visualization)
19
hg19
8
GRCh38
Lab
47
Klaus Kaestner, Upenn
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
November, 2018
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
84 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 8 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
aorta
2
heart right ventricle
2
+ See 9 more…
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