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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
DNase-seq
2
Hi-C
1
ATAC-seq
FAIRE-seq
Assay category
18
DNA binding
3
DNA accessibility
2
3D chromatin structure
Target of assay
16
histone
16
histone modification
9
broad histone mark
7
narrow histone mark
2
control
Date released
22
October, 2019
1
March, 2020
Available data
20
bam
15
bigWig
13
bed narrowPeak
12
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tagAlign
Organism
23
Homo sapiens
Biosample type
21
primary cell
2
tissue
Organ
938
pancreas
738
liver
683
connective tissue
523
epithelium
490
adipose tissue
393
heart
353
kidney
283
brain
235
vasculature
229
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
54
blood
54
bodily fluid
43
nerve
37
embryo
21
vein
20
lung
18
ureter
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
17
hg19
13
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
November, 2018
assay_title!
FAIRE-seq
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
ATAC-seq
primary cell
endothelial cell of umbilical vein
17
2
2
tissue
islet of Langerhans
1
pituitary gland
1
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