Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
396
total RNA-seq
19
ChIP-seq
6
ATAC-seq
3
small RNA-seq
1
DNase-seq
Assay category
399
Transcription
19
DNA binding
7
DNA accessibility
Target of assay
17
transcription factor
5
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
Date released
386
February, 2021
15
August, 2017
12
July, 2019
5
October, 2018
1
February, 2023
1
January, 2018
1
June, 2019
1
May, 2023
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
422
bigWig
420
bam
398
tsv
20
fastq
12
bed narrowPeak
9
bigBed narrowPeak
5
bed bed3+
2
bed broadPeak
1
bigBed broadPeak
1
tagAlign
Organism
425
Homo sapiens
Biosample type
423
tissue
2
primary cell
Organ
655
pancreas
588
connective tissue
576
liver
425
adipose tissue
311
epithelium
188
heart
165
vasculature
162
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
43
blood
43
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
12
skeleton
10
spleen
2
pericardium
1
pituitary gland
Project
425
AMP
Genome assembly (visualization)
425
hg19
423
GRCh38
Lab
425
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
12
missing controlled_by
month_released!
November, 2018
BIOSAMPLE
ASSAY
425 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
small RNA-seq
DNase-seq
tissue
adipose tissue
382
1
3
white adipose tissue
12
omental fat pad
4
3
1
1
1
subcutaneous adipose tissue
6
2
1
1
visceral abdominal adipose tissue
3
+ See 2 more…
primary cell
mesenchymal stem cell of adipose
1
1
See all biosamples
Download