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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
1
ATAC-seq
Assay category
18
DNA binding
1
DNA accessibility
Target of assay
10
histone
10
histone modification
6
broad histone mark
5
control
4
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
10
October, 2017
9
November, 2017
November, 2018
Available data
241
bam
220
bigWig
201
bed narrowPeak
125
bigBed narrowPeak
118
tagAlign
45
bed broadPeak
36
bigBed broadPeak
33
bed bed3+
26
tsv
19
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
19
Homo sapiens
Biosample type
10
tissue
9
primary cell
Organ
440
pancreas
412
liver
257
epithelium
100
connective tissue
45
blood
45
bodily fluid
43
adipose tissue
27
embryo
19
brain
15
spleen
6
vasculature
3
blood vessel
2
musculature of body
Project
19
AMP
Genome assembly (visualization)
15
hg19
13
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
4
missing controlled_by
month_released!
November, 2018
May, 2022
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
ATAC-seq
tissue
brain
9
cerebellum (Hemisphere)
1
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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