Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
Assay category
6
3D chromatin structure
Date released
4
July, 2019
1
March, 2019
1
October, 2019
Available data
3101
bam
2869
bigWig
1612
bed narrowPeak
1504
tsv
1246
fastq
969
bigBed narrowPeak
314
tagAlign
313
bed broadPeak
276
bigBed broadPeak
262
bed bed3+
155
txt
153
zippedFastqFolder
64
xls
29
bed bedMethyl
29
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
7
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
6
Homo sapiens
Biosample type
4
primary cell
1
cell line
1
tissue
Organ
3
brain
2
blood vessel
2
epithelium
2
pancreas
2
vasculature
1
connective tissue
1
liver
Project
6
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent assembly
month_released!
November, 2018
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
6 results
search-icon
table-tab-icon
Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
tissue
islet of Langerhans
1
Download