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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
WGBS
20
RRBS
1
DNAme array
Assay category
1608
DNA binding
1436
Transcription
789
DNA accessibility
83
DNA methylation
33
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
26
July, 2019
9
August, 2017
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
26
bed bedMethyl
26
bigBed bedMethyl
11
fastq
9
bam
8
bigWig
6
tsv
Organism
83
Homo sapiens
Biosample type
57
primary cell
26
tissue
Organ
53
epithelium
49
pancreas
10
heart
connective tissue
6
adipose tissue
6
liver
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
47
HPAP
36
AMP
Genome assembly (visualization)
18
hg19
8
GRCh38
Lab
47
Klaus Kaestner, Upenn
36
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
November, 2018
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
83 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
aorta
2
heart right ventricle
2
+ See 9 more…
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