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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
Assay category
34
DNA binding
Target of assay
83
histone
83
histone modification
49
broad histone mark
34
narrow histone mark
29
control
12
transcription factor
5
RNA binding protein
Date released
14
May, 2019
10
October, 2019
5
December, 2017
3
February, 2018
2
November, 2017
Available data
34
bam
32
bed narrowPeak
32
bigWig
25
bigBed narrowPeak
10
fastq
2
bed broadPeak
2
bigBed broadPeak
1
bed bed3+
Organism
34
Homo sapiens
Biosample type
18
tissue
8
in vitro differentiated cells
8
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
34
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
November, 2018
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
tissue
aorta
4
ascending aorta
4
thoracic aorta
4
tibial artery
4
coronary artery
2
in vitro differentiated cells
pancreatic endoderm
6
Hepatic endoderm
2
primary cell
endothelial cell of umbilical vein
6
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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