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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
Assay category
56
DNA binding
Target of assay
173
histone
173
histone modification
101
broad histone mark
71
narrow histone mark
56
transcription factor
53
control
20
RNA binding protein
2
chromatin remodeller
Date released
34
August, 2017
5
April, 2019
5
May, 2024
5
October, 2018
4
February, 2021
2
May, 2019
1
June, 2019
Available data
56
bigWig
51
bam
39
bed narrowPeak
39
fastq
13
bigBed narrowPeak
10
bed bed3+
4
tagAlign
Organism
56
Homo sapiens
Biosample type
29
tissue
22
in vitro differentiated cells
4
cell line
1
primary cell
Organ
289
liver
40
connective tissue
39
blood
39
bodily fluid
19
pancreas
17
adipose tissue
17
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
5
artery
3
brain
3
embryo
3
spleen
1
eye
Project
56
AMP
Genome assembly (visualization)
56
GRCh38
51
hg19
Lab
51
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
1
inconsistent ontology term
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
November, 2018
BIOSAMPLE
ASSAY
56 results
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ChIP-seq
tissue
white adipose tissue
12
heart left ventricle
5
left cardiac atrium
5
omental fat pad
3
subcutaneous adipose tissue
2
+ See 2 more…
in vitro differentiated cells
adipocyte
22
cell line
smooth muscle cell of the coronary artery
4
primary cell
cardiac fibroblast
1
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