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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
169
total RNA-seq
3
small RNA-seq
2
pCHi-C
Assay category
172
Transcription
Date released
144
May, 2020
9
August, 2021
7
July, 2019
5
December, 2019
5
January, 2019
2
March, 2020
1
February, 2020
1
October, 2019
Available data
628
bam
570
bigWig
412
fastq
390
bed narrowPeak
307
bigBed narrowPeak
174
tsv
86
tagAlign
60
bed broadPeak
60
bigBed broadPeak
10
bed bed3+
3
tar
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
174
Homo sapiens
Biosample type
154
tissue
15
cell line
5
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
174
AMP
Genome assembly (visualization)
162
GRCh38
162
hg19
Lab
165
AMP-T2D consortium
9
Bing Ren, UCSD
month_released!
November, 2018
BIOSAMPLE
ASSAY
174 results
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total RNA-seq
small RNA-seq
pCHi-C
tissue
liver
147
1
1
right lobe of liver
3
2
cell line
HepG2
14
1
primary cell
hepatocyte
5
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