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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
DNase-seq
6
ChIP-seq
Assay category
45
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
39
June, 2019
8
October, 2019
4
November, 2017
Available data
273
bam
225
bigWig
204
bed narrowPeak
147
bigBed narrowPeak
74
tsv
51
bed broadPeak
51
bigBed broadPeak
47
bed bed3+
6
fastq
6
tagAlign
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
51
Homo sapiens
Biosample type
39
tissue
12
primary cell
Organ
78
kidney
60
liver
36
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
8
connective tissue
5
pancreas
4
artery
4
eye
4
vein
2
nerve
1
adipose tissue
Project
51
AMP
Genome assembly (visualization)
50
hg19
49
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
November, 2018
BIOSAMPLE
ASSAY
51 results
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DNase-seq
ChIP-seq
tissue
muscle of arm
17
muscle of leg
13
coronary artery
2
tibial artery
2
tibial nerve
2
+ See 3 more…
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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