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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
35
transcription factor
10
histone
10
histone modification
6
chromatin remodeller
6
narrow histone mark
4
broad histone mark
3
RNA binding protein
1
recombinant protein
Date released
27
August, 2017
10
November, 2017
4
October, 2017
3
November, 2018
1
December, 2017
Available data
45
fastq
44
bam
42
bigWig
16
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
45
Homo sapiens
Biosample type
primary cell
26
tissue
13
cell line
6
in vitro differentiated cells
Organ
17
connective tissue
13
liver
12
adipose tissue
10
pancreas
4
brain
1
embryo
Project
45
AMP
Genome assembly (visualization)
42
hg19
35
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
45
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
November, 2019
biosample_type!
primary cell
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
10
brain
4
cell line
HepG2
13
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
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