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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
total RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
471
DNA binding
114
Transcription
30
DNA accessibility
3
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
78
February, 2021
17
August, 2021
5
January, 2019
4
March, 2020
4
May, 2021
4
October, 2019
2
March, 2023
November, 2019
Available data
112
tsv
103
bam
103
bigWig
5
fastq
Organism
112
Homo sapiens
Biosample type
1208
tissue
436
primary cell
138
in vitro differentiated cells
114
cell line
stem cell
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
33
epithelium
32
pancreas
14
liver
8
embryo
4
kidney
Project
110
AMP
2
T1D
2
community
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
103
AMP-T2D consortium
9
Bing Ren, UCSD
2
Anna Gloyn, Oxford
Audit category:
35
inconsistent ontology term
month_released!
November, 2019
biosample_type!
stem cell
BIOSAMPLE
ASSAY
114 results
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total RNA-seq
shRNA RNA-seq
siRNA RNA-seq
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
32
HepG2
14
H1-hESC
8
EndoC-BH1
1
1
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