Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
Hi-C
3
pCHi-C
Assay category
14
3D chromatin structure
Date released
11
March, 2020
3
October, 2019
2
August, 2021
1
August, 2018
November, 2019
Available data
3031
bam
2804
bigWig
1597
bed narrowPeak
1425
tsv
1101
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
250
bed bed3+
158
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
17
bedpe bed3+
16
hic
12
bed bed3
8
csv
4
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
17
Homo sapiens
Biosample type
9
tissue
7
in vitro differentiated cells
1
cell line
Organ
5
pancreas
epithelium
3
heart
2
blood vessel
2
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
vein
Project
17
AMP
Genome assembly (visualization)
15
hg19
Lab
15
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
month_released!
November, 2019
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
epithelium
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
Hi-C
pCHi-C
tissue
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
+ See 3 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
white fat cell
1
cell line
HepG2
1
See all biosamples
Download