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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
181
DNase-seq
34
ChIP-seq
7
ATAC-seq
Assay category
188
DNA accessibility
34
DNA binding
Target of assay
23
histone
23
histone modification
14
broad histone mark
9
narrow histone mark
8
control
3
RNA binding protein
3
transcription factor
Date released
406
November, 2017
397
May, 2021
341
May, 2020
314
August, 2021
310
October, 2019
286
August, 2017
260
February, 2021
200
June, 2019
200
May, 2022
191
February, 2023
166
July, 2018
120
May, 2019
94
December, 2017
90
July, 2019
87
November, 2018
80
April, 2019
73
September, 2018
62
March, 2020
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
214
bam
208
bigWig
206
bed narrowPeak
201
bigBed narrowPeak
185
bed broadPeak
181
bed bed3+
181
bigBed broadPeak
16
fastq
14
tagAlign
Organism
222
Homo sapiens
Biosample type
184
tissue
38
primary cell
Organ
81
kidney
46
brain
43
musculature of body
35
heart
32
limb
20
epithelium
connective tissue
18
ureter
9
pancreas
7
eye
7
vasculature
5
blood vessel
2
adipose tissue
2
artery
2
liver
1
spleen
Project
222
AMP
Genome assembly (visualization)
208
GRCh38
185
hg19
Lab
221
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
14
inconsistent ontology term
Audit category:
4
missing controlled_by
month_released!
November, 2019
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
222 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
brain
12
15
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
skeletal muscle satellite cell
8
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
skeletal muscle cell
1
2
+ See 13 more…
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