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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
374
ChIP-seq
1
Hi-C
Assay category
374
DNA binding
1
3D chromatin structure
Target of assay
272
transcription factor
88
histone
88
histone modification
75
control
recombinant protein
50
broad histone mark
39
RNA binding protein
38
narrow histone mark
17
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
340
November, 2017
319
August, 2021
307
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
72
November, 2018
64
March, 2020
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
360
bam
298
bigWig
293
fastq
277
bed narrowPeak
276
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
375
Homo sapiens
Biosample type
277
cell line
89
tissue
9
primary cell
Organ
250
liver
91
brain
27
blood
27
bodily fluid
7
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
375
AMP
Genome assembly (visualization)
246
hg19
244
GRCh38
Lab
375
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
10
missing controlled_by
Audit category:
20
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2019
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
375 results
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Clear Filters
ChIP-seq
Hi-C
cell line
HepG2
249
1
GM12878
27
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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