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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
ChIP-seq
1
Hi-C
Assay category
168
DNA binding
1
3D chromatin structure
Target of assay
transcription factor
88
histone
88
histone modification
75
control
66
recombinant protein
50
broad histone mark
39
RNA binding protein
38
narrow histone mark
17
chromatin remodeller
2
other context
2
other post-translational modification
Date released
710
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
308
August, 2021
307
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
162
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
61
October, 2018
November, 2019
59
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
155
bam
96
bigWig
87
fastq
79
bed narrowPeak
78
bigBed narrowPeak
78
tagAlign
23
bed broadPeak
17
bigBed broadPeak
Organism
169
Homo sapiens
Biosample type
86
tissue
77
cell line
6
primary cell
Organ
88
brain
75
liver
4
epithelium
4
spleen
4
vasculature
2
blood
2
blood vessel
2
bodily fluid
Project
169
AMP
Genome assembly (visualization)
78
GRCh38
45
hg19
Lab
169
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
November, 2019
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
169 results
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Clear Filters
ChIP-seq
Hi-C
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 2 more…
cell line
HepG2
74
1
GM12878
2
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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