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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
243
ChIP-seq
Assay category
243
DNA binding
Target of assay
243
transcription factor
87
histone
87
histone modification
70
control
66
recombinant protein
50
broad histone mark
37
narrow histone mark
36
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
243
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
May, 2024
4
June, 2019
2
May, 2019
1
February, 2021
November, 2019
Available data
243
fastq
242
bam
239
bigWig
235
bed narrowPeak
235
bigBed narrowPeak
46
bed broadPeak
46
bigBed broadPeak
3
tar
Organism
243
Homo sapiens
Biosample type
241
cell line
2
primary cell
Organ
241
liver
3
brain
2
epithelium
2
vasculature
blood vessel
Project
243
AMP
Genome assembly (visualization)
237
hg19
203
GRCh38
Lab
243
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2019
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
243 results
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ChIP-seq
cell line
HepG2
241
primary cell
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
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