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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
19
total RNA-seq
4
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
29
DNA accessibility
19
Transcription
4
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
control
Date released
31
February, 2023
23
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
Available data
34
bed narrowPeak
8
bam
7
bigWig
bigBed narrowPeak
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign
Organism
57
Homo sapiens
Biosample type
55
tissue
2
primary cell
Organ
800
pancreas
655
connective tissue
480
adipose tissue
433
liver
432
epithelium
299
heart
250
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
57
AMP
Genome assembly (visualization)
29
hg19
1
GRCh38
Lab
57
AMP-T2D consortium
month_released!
November, 2019
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
2
14
2
4
retina
15
3
pigmented layer of retina
12
2
pituitary gland
1
primary cell
retinal pigment epithelial cell
1
1
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