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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
control
Date released
31
February, 2023
21
October, 2019
1
February, 2020
1
July, 2019
Available data
33
bed narrowPeak
6
bam
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
54
Homo sapiens
Biosample type
53
tissue
1
primary cell
Organ
749
pancreas
620
connective tissue
456
adipose tissue
404
epithelium
325
liver
279
heart
238
kidney
159
bone element
131
vasculature
130
blood vessel
128
brain
107
artery
54
eye
43
musculature of body
30
embryo
21
limb
20
lung
16
skeleton
9
blood
9
bodily fluid
7
vein
6
nerve
5
gonad
5
ovary
4
spleen
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
28
hg19
Lab
54
AMP-T2D consortium
month_released!
November, 2019
files.file_type!
bigBed narrowPeak
target.investigated_as!
control
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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