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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
Assay category
65
Transcription
12
DNA methylation
8
3D chromatin structure
6
DNA accessibility
Target of assay
3
control
Date released
715
February, 2021
399
May, 2021
363
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
94
November, 2017
91
July, 2019
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
85
bigWig
82
bam
65
tsv
8
bed bedMethyl
8
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
bigBed narrowPeak
Organism
91
Homo sapiens
Biosample type
69
tissue
22
primary cell
Organ
23
heart
17
connective tissue
15
brain
12
adipose tissue
11
blood vessel
11
vasculature
9
liver
9
musculature of body
7
epithelium
6
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
91
AMP
Genome assembly (visualization)
79
GRCh38
74
hg19
Lab
91
AMP-T2D consortium
month_released!
November, 2020
assay_title!
RRBS
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
91 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
2
4
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 21 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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