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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
ATAC-seq
2
Capture-C
2
Hi-C
Assay category
14
DNA binding
2
3D chromatin structure
2
DNA accessibility
Target of assay
11
transcription factor
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
55
November, 2017
53
May, 2020
45
February, 2023
40
May, 2021
39
May, 2022
29
August, 2017
21
July, 2019
20
August, 2021
16
March, 2020
10
October, 2019
6
February, 2021
3
January, 2018
3
October, 2022
2
November, 2019
1
April, 2019
1
March, 2019
1
May, 2019
1
November, 2018
Available data
16
bed narrowPeak
16
bigWig
2
bed bed3+
2
hic
1
bedpe bed3+
Organism
20
Homo sapiens
Biosample type
15
cell line
4
in vitro differentiated cells
1
tissue
Organ
15
liver
4
connective tissue
1
kidney
Project
20
AMP
Genome assembly (visualization)
GRCh38
60
hg19
Lab
15
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
1
Katalin Susztak, Upenn
month_released!
November, 2020
assembly!
GRCh38
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
ATAC-seq
Capture-C
Hi-C
cell line
HepG2
14
1
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
tissue
kidney
1
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