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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
Assay category
55
DNA binding
Target of assay
36
transcription factor
16
control
4
RNA binding protein
3
histone
3
histone modification
2
chromatin remodeller
2
narrow histone mark
1
broad histone mark
Date released
55
November, 2017
53
May, 2020
45
February, 2023
40
May, 2021
39
May, 2022
29
August, 2017
21
July, 2019
20
August, 2021
16
March, 2020
10
October, 2019
6
February, 2021
3
January, 2018
3
October, 2022
2
November, 2019
1
April, 2019
1
March, 2019
1
May, 2019
1
November, 2018
Available data
55
bigWig
54
bam
54
fastq
33
bed narrowPeak
32
bigBed narrowPeak
15
bed broadPeak
14
bigBed broadPeak
4
tagAlign
3
tar
Organism
55
Homo sapiens
Biosample type
51
cell line
3
primary cell
1
tissue
Organ
51
liver
4
brain
2
epithelium
2
vasculature
1
blood vessel
Project
55
AMP
Genome assembly (visualization)
281
hg19
GRCh38
Lab
55
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
4
inconsistent control read length
2
inconsistent control run_type
month_released!
November, 2020
assembly!
GRCh38
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
cell line
HepG2
51
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
tissue
cingulate gyrus
1
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