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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
single cell RNA-seq
23
ATAC-seq
22
snATAC-seq
20
total RNA-seq
5
GRO-seq
Assay category
54
Transcription
45
DNA accessibility
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
54
zippedFastqFolder
28
bigWig
20
bed narrowPeak
5
fastq
1
bed bed3+
1
txt
Organism
104
Homo sapiens
Biosample type
54
primary cell
44
tissue
4
in vitro differentiated cells
1
cell line
1
stem cell
Organ
pancreas
80
epithelium
40
liver
3
musculature of body
1
adipose tissue
1
blood
1
bodily fluid
1
connective tissue
1
embryo
Project
54
HPAP
50
AMP
Genome assembly (visualization)
24
hg19
5
hg18
Lab
54
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
10
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
November, 2020
organ_slims!
pancreas
BIOSAMPLE
ASSAY
104 results
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Clear Filters
single cell RNA-seq
ATAC-seq
snATAC-seq
total RNA-seq
GRO-seq
primary cell
Langerhans cell
33
21
tissue
liver
20
20
skeletal muscle tissue
1
1
1
adipose tissue
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
GM12878
1
stem cell
hESC
1
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