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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
212
ChIP-seq
Assay category
503
Transcription
421
DNA accessibility
212
DNA binding
78
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Target of assay
172
histone
172
histone modification
86
broad histone mark
86
narrow histone mark
23
control
17
transcription factor
6
RNA binding protein
Date released
115
August, 2017
May, 2021
40
May, 2024
23
October, 2019
19
August, 2021
14
November, 2017
October, 2017
1
April, 2019
Available data
bam
1261
bigWig
1199
bed narrowPeak
848
fastq
795
bigBed narrowPeak
294
tagAlign
111
bed broadPeak
79
bigBed broadPeak
53
bed bed3+
3
tar
1
tagAlign bed3+
Organism
212
Homo sapiens
Biosample type
178
tissue
19
cell line
15
in vitro differentiated cells
Organ
51
connective tissue
42
liver
41
heart
36
adipose tissue
22
musculature of body
20
pancreas
15
brain
4
gonad
4
ovary
2
eye
1
limb
1
lymph node
Project
212
AMP
Genome assembly (visualization)
42
GRCh38
38
hg19
Lab
154
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
18
Bing Ren, UCSD
month_released!
October, 2017
May, 2021
files.file_type!
bam
BIOSAMPLE
ASSAY
212 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
41
left cardiac atrium
40
subcutaneous abdominal adipose tissue
36
liver
23
skeletal muscle tissue
22
+ See 8 more…
cell line
HepG2
19
in vitro differentiated cells
adipocyte
14
neural progenitor cell
1
See all biosamples
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