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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
Assay category
83
DNA binding
Target of assay
49
histone
49
histone modification
34
transcription factor
27
narrow histone mark
22
broad histone mark
6
chromatin remodeller
3
RNA binding protein
Date released
39
August, 2017
32
September, 2018
10
November, 2017
October, 2017
2
November, 2018
Available data
83
bam
83
bigWig
83
fastq
45
bed narrowPeak
14
bed bed3+
12
bigBed narrowPeak
Organism
83
Homo sapiens
Biosample type
44
primary cell
22
tissue
12
cell line
5
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
12
liver
Project
83
AMP
Genome assembly (visualization)
83
hg19
76
GRCh38
Lab
83
AMP-T2D consortium
Audit category:
83
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
October, 2017
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
cell line
HepG2
12
in vitro differentiated cells
adipocyte
5
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