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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
36
DNase-seq
4
total RNA-seq
2
ATAC-seq
Assay category
48
DNA binding
38
DNA accessibility
4
Transcription
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
May, 2019
Available data
90
bam
90
bigWig
86
bed narrowPeak
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
Organism
90
Homo sapiens
Biosample type
90
tissue
Organ
653
pancreas
625
liver
588
connective tissue
425
adipose tissue
311
epithelium
188
heart
165
vasculature
159
blood vessel
158
brain
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
13
spleen
skeleton
2
pericardium
1
pituitary gland
Project
90
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
90
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2017
organ_slims!
skeleton
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
forelimb muscle
1
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