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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
172
ChIP-seq
Assay category
172
DNA binding
Target of assay
309
histone
309
histone modification
172
narrow histone mark
137
broad histone mark
66
control
9
transcription factor
Date released
41
May, 2021
40
October, 2019
29
August, 2017
27
May, 2020
26
November, 2017
9
August, 2021
October, 2017
Available data
424
bigWig
413
bed narrowPeak
404
bam
172
tagAlign
148
bigBed narrowPeak
109
fastq
28
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
170
Homo sapiens
Biosample type
108
tissue
47
primary cell
12
in vitro differentiated cells
5
cell line
Organ
52
brain
40
liver
7
connective tissue
7
pancreas
5
musculature of body
3
adipose tissue
3
epithelium
1
pituitary gland
Project
132
AMP
40
T1D
Genome assembly (visualization)
141
hg19
134
GRCh38
Lab
132
AMP-T2D consortium
40
Kyle Gaulton, UCSD
Audit category:
5
inconsistent control read length
month_released!
October, 2017
BIOSAMPLE
ASSAY
172 results
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ChIP-seq
tissue
liver
33
substantia nigra
6
caudate nucleus
5
cingulate gyrus
5
layer of hippocampus
5
+ See 42 more…
primary cell
monocyte
40
skeletal muscle myoblast
5
hepatocyte
2
in vitro differentiated cells
neural progenitor cell
7
adipocyte
4
pancreatic PP cell
1
cell line
HepG2
5
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