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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
29
ATAC-seq
17
pCHi-C
total RNA-seq
1
DNAme array
Assay category
42
DNA binding
29
DNA accessibility
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
5
RNA binding protein
Date released
213
August, 2021
164
February, 2021
154
May, 2022
139
August, 2017
109
February, 2023
93
October, 2019
89
May, 2021
79
May, 2020
72
November, 2017
47
September, 2023
42
March, 2020
40
September, 2020
30
November, 2019
29
October, 2018
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
14
May, 2023
11
November, 2020
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
133
bed narrowPeak
bigWig
104
bam
90
tagAlign
Organism
89
Homo sapiens
Biosample type
38
in vitro differentiated cells
34
primary cell
16
cell line
1
tissue
Organ
17
epithelium
17
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
72
AMP
17
T1D
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
54
Kyle Gaulton, UCSD
35
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
month_released!
October, 2017
files.file_type!
bigWig
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
in vitro differentiated cells
embryonic stem cell
37
pancreatic PP cell
1
primary cell
monocyte
1
13
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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cell line
EndoC_BH1
16
tissue
thymus
1
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