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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
2
Hi-C
Assay category
7
DNA accessibility
2
3D chromatin structure
Date released
5
June, 2019
2
July, 2019
2
October, 2019
Available data
83
bam
70
bigWig
59
bed narrowPeak
58
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
10
tsv
9
bed bed3+
6
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
9
Homo sapiens
Biosample type
8
primary cell
1
tissue
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
9
AMP
Genome assembly (visualization)
8
hg19
7
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2017
organ_slims!
artery
BIOSAMPLE
ASSAY
9 results
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DNase-seq
Hi-C
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
+ See 1 more…
tissue
ascending aorta
1
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