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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
17
ATAC-seq
9
total RNA-seq
2
Capture-C
1
DNase-seq
1
pCHi-C
Assay category
18
DNA accessibility
9
Transcription
Date released
13
February, 2023
8
February, 2021
4
August, 2021
2
October, 2019
1
August, 2017
1
August, 2018
1
May, 2021
Available data
10
bigWig
6
bam
6
bed bed3+
5
bed bed3
5
tsv
4
bed bedgraph
3
bed narrowPeak
3
bigBed narrowPeak
2
fastq
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
Organism
30
Homo sapiens
Biosample type
473
tissue
30
in vitro differentiated cells
27
primary cell
1
stem cell
Organ
30
connective tissue
7
embryo
2
epithelium
1
adipose tissue
1
heart
Project
30
AMP
Genome assembly (visualization)
25
hg19
6
GRCh38
Lab
26
AMP-T2D consortium
4
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
month_released!
October, 2018
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
30 results
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ATAC-seq
total RNA-seq
Capture-C
DNase-seq
pCHi-C
in vitro differentiated cells
adipocyte
8
5
1
1
chondrocyte
5
immature adipocyte
2
2
osteoblast
1
1
preadipocyte
1
1
cardiac fibroblast
1
white fat cell
1
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