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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
395
total RNA-seq
167
ChIP-seq
152
ATAC-seq
80
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
2
DNA accessibility
Date released
2
August, 2021
1
August, 2017
1
November, 2018
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
Organism
4
Homo sapiens
Biosample type
2
cell line
2
tissue
Organ
4
pancreas
3
epithelium
2
connective tissue
1
blood vessel
1
brain
1
kidney
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
2
hg19
Lab
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
October, 2018
BIOSAMPLE
ASSAY
4 results
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Capture-C
FAIRE-seq
cell line
EndoC_BH1
2
tissue
islet of Langerhans
1
pancreas
1
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