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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
1
ATAC-seq
Assay category
20
DNA binding
1
DNA accessibility
Target of assay
12
histone
12
histone modification
8
transcription factor
7
recombinant protein
6
broad histone mark
6
narrow histone mark
1
RNA binding protein
Date released
12
November, 2019
7
October, 2019
1
March, 2020
1
May, 2021
Available data
62
bam
58
bigWig
39
tsv
21
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
21
Homo sapiens
Biosample type
25
primary cell
21
cell line
13
in vitro differentiated cells
4
tissue
Organ
14
epithelium
14
pancreas
7
kidney
Project
19
AMP
2
T1D
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
21
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
1
inconsistent control
1
inconsistent replicate
month_released!
October, 2018
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
ATAC-seq
cell line
EndoC_BH1
13
1
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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