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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
86
ChIP-seq
16
pCHi-C
8
snATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
86
DNA binding
8
DNA accessibility
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
Date released
101
May, 2021
8
January, 2021
5
February, 2023
1
March, 2020
Available data
86
bam
86
bed narrowPeak
86
bigWig
84
tagAlign
Organism
115
Homo sapiens
Biosample type
108
primary cell
tissue
7
cell line
Organ
8
blood
8
bodily fluid
2
epithelium
2
pancreas
1
bone element
1
bone marrow
1
connective tissue
Project
1306
AMP
232
HPAP
115
T1D
4
community
1
ITG
Genome assembly (visualization)
86
GRCh38
86
hg19
Lab
113
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
October, 2018
biosample_type!
tissue
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ChIP-seq
pCHi-C
snATAC-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
primary cell
monocyte
84
1
peripheral blood mononuclear cell
8
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
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cell line
EndoC_BH1
2
3
2
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