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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
8
DNase-seq
3
ATAC-seq
1
FAIRE-seq
Assay category
58
DNA binding
12
DNA accessibility
Target of assay
58
histone
58
histone modification
38
broad histone mark
20
narrow histone mark
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
250
bam
207
bigWig
189
bed narrowPeak
70
bigBed narrowPeak
49
tagAlign
16
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
70
Homo sapiens
Biosample type
47
tissue
13
primary cell
8
cell line
2
in vitro differentiated cells
Organ
46
limb
33
blood vessel
33
vasculature
26
nerve
20
artery
14
epithelium
13
vein
7
pancreas
3
connective tissue
1
adipose tissue
1
kidney
Project
70
AMP
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
70
AMP-T2D consortium
month_released!
October, 2018
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial nerve
24
2
tibial artery
18
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
10
2
1
cell line
Panc1
6
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
2
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