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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
1
whole genome sequencing assay
Assay category
3
DNA binding
1
DNA sequencing
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
1
August, 2021
Available data
3296
bam
3107
bigWig
1759
bed narrowPeak
1598
tsv
1298
fastq
984
bigBed narrowPeak
398
tagAlign
318
bed broadPeak
281
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
22
bedpe bed3+
21
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
4
cell line
Organ
4
liver
1
blood vessel
1
epithelium
1
vasculature
vein
Project
4
AMP
Genome assembly (visualization)
3
hg19
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
month_released!
October, 2018
organ_slims!
vein
BIOSAMPLE
ASSAY
4 results
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ChIP-seq
whole genome sequencing assay
cell line
HepG2
3
1
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