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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
7
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
6
histone
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
9
November, 2018
December, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
11
bam
11
fastq
7
bigWig
5
bed narrowPeak
4
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
12
Homo sapiens
Biosample type
12
tissue
Organ
772
pancreas
687
liver
583
connective tissue
436
adipose tissue
429
epithelium
324
kidney
296
heart
165
vasculature
160
blood vessel
159
bone element
121
artery
99
brain
73
limb
63
musculature of body
58
eye
41
blood
41
bodily fluid
25
embryo
20
lung
19
nerve
18
ureter
16
skeleton
12
spleen
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
7
GRCh38
5
hg19
Lab
12
AMP-T2D consortium
month_released!
October, 2018
December, 2018
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
7
2
1
1
1
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