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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
16
small RNA-seq
12
WGBS
10
snATAC-seq
9
single cell RNA-seq
6
ATAC-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
56
Transcription
18
DNA accessibility
18
DNA methylation
4
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
64
bam
63
bigWig
47
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
Organism
95
Homo sapiens
Biosample type
96
tissue
31
primary cell
Organ
20
heart
19
lung
11
brain
10
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
6
pancreas
5
limb
4
kidney
1
artery
1
pericardium
Project
77
AMP
19
LungMap
Genome assembly (visualization)
61
GRCh38
60
hg19
Lab
77
AMP-T2D consortium
19
Xin Sun, UCSD
month_released!
October, 2018
BIOSAMPLE
ASSAY
96 results
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total RNA-seq
small RNA-seq
WGBS
snATAC-seq
single cell RNA-seq
ATAC-seq
RRBS
Hi-C
FAIRE-seq
tissue
lung
10
9
heart left ventricle
2
4
2
1
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
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