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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
40
single cell RNA-seq
16
total RNA-seq
8
ATAC-seq
Assay category
86
DNA binding
56
Transcription
8
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
20
control
6
transcription factor
4
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
90
bam
73
bigWig
70
bed narrowPeak
69
bigBed narrowPeak
52
fastq
19
zippedFastqFolder
2
bed bed3+
Organism
150
Homo sapiens
Biosample type
86
tissue
64
primary cell
Organ
57
heart
30
pancreas
24
epithelium
23
kidney
Project
91
AMP
59
HPAP
Genome assembly (visualization)
74
GRCh38
72
hg19
Lab
91
AMP-T2D consortium
59
Klaus Kaestner, Upenn
month_released!
October, 2018
BIOSAMPLE
ASSAY
150 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
islet of Langerhans
6
primary cell
Langerhans cell
40
pancreatic alpha cell
15
4
pancreatic beta cell
1
3
pancreatic acinar cell
1
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