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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
ChIP-seq
Assay category
150
DNA binding
Target of assay
84
histone
84
histone modification
66
control
45
broad histone mark
39
narrow histone mark
Date released
68
August, 2017
31
May, 2020
24
November, 2017
9
October, 2019
8
October, 2017
7
August, 2021
3
February, 2021
Available data
371
bam
304
fastq
230
bigWig
190
tsv
172
bed narrowPeak
161
txt
150
tagAlign
73
zippedFastqFolder
43
bigBed narrowPeak
38
bed broadPeak
18
bedpe bed3+
16
bigBed broadPeak
16
hic
13
bed bed3+
13
bed bedMethyl
13
bigBed bedMethyl
10
bed bed3
8
csv
7
bed bedgraph
3
tar
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
149
Homo sapiens
Biosample type
122
tissue
21
in vitro differentiated cells
6
cell line
1
primary cell
Organ
55
liver
36
brain
22
connective tissue
15
musculature of body
11
pancreas
8
adipose tissue
2
artery
2
blood vessel
epithelium
2
heart
2
vasculature
Project
150
AMP
Genome assembly (visualization)
GRCh38
233
hg19
Lab
150
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
October, 2018
organ_slims!
epithelium
assembly!
GRCh38
BIOSAMPLE
ASSAY
150 results
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ChIP-seq
tissue
liver
51
skeletal muscle tissue
15
islet of Langerhans
9
brain
8
cingulate gyrus
8
+ See 15 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
cell line
HepG2
3
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
primary cell
skeletal muscle myoblast
1
See all biosamples
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