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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
401
total RNA-seq
74
single cell RNA-seq
2
small RNA-seq
Assay category
477
Transcription
173
DNA accessibility
167
DNA binding
53
DNA methylation
9
3D chromatin structure
Date released
157
July, 2018
89
August, 2017
42
February, 2023
41
May, 2021
39
April, 2018
26
February, 2021
26
September, 2018
20
November, 2019
16
September, 2020
6
May, 2022
5
March, 2020
4
July, 2019
3
August, 2018
October, 2018
1
August, 2021
1
February, 2020
1
June, 2018
Available data
410
bam
406
tsv
404
bigWig
251
fastq
6
txt
Organism
477
Homo sapiens
Biosample type
291
tissue
153
primary cell
33
cell line
Organ
481
connective tissue
477
pancreas
401
adipose tissue
199
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
415
AMP
53
HPAP
9
T1D
Genome assembly (visualization)
404
GRCh38
404
hg19
Lab
411
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
38
inconsistent ontology term
month_released!
October, 2018
BIOSAMPLE
ASSAY
477 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
284
body of pancreas
3
2
pancreas
2
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
2
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
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cell line
EndoC_BH1
33
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