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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
total RNA-seq
74
single cell RNA-seq
Assay category
186
Transcription
101
DNA binding
91
DNA accessibility
47
DNA methylation
5
3D chromatin structure
Date released
37
February, 2023
37
July, 2018
33
April, 2018
26
February, 2021
26
September, 2018
16
September, 2020
4
May, 2021
3
August, 2018
2
March, 2020
October, 2018
1
June, 2018
1
November, 2019
Available data
148
fastq
133
bam
133
bigWig
133
tsv
Organism
186
Homo sapiens
Biosample type
tissue
153
primary cell
33
cell line
Organ
197
epithelium
186
pancreas
57
heart
54
artery
54
blood vessel
54
vasculature
24
connective tissue
19
liver
14
embryo
10
kidney
3
brain
2
adipose tissue
2
musculature of body
1
pericardium
Project
131
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
133
GRCh38
133
hg19
Lab
133
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
38
inconsistent ontology term
month_released!
October, 2018
biosample_type!
tissue
BIOSAMPLE
ASSAY
186 results
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total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
2
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
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cell line
EndoC_BH1
33
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