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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
379
total RNA-seq
80
single cell RNA-seq
2
small RNA-seq
Assay category
461
Transcription
170
DNA accessibility
167
DNA binding
53
DNA methylation
9
3D chromatin structure
Date released
157
July, 2018
89
August, 2017
42
February, 2023
41
May, 2021
39
April, 2018
26
February, 2021
26
September, 2018
20
November, 2019
September, 2020
6
May, 2022
5
March, 2020
4
July, 2019
3
August, 2018
October, 2018
1
August, 2021
1
February, 2020
1
June, 2018
Available data
410
bam
406
tsv
404
bigWig
235
fastq
6
txt
Organism
461
Homo sapiens
Biosample type
291
tissue
137
primary cell
33
cell line
Organ
481
connective tissue
461
pancreas
401
adipose tissue
193
liver
183
epithelium
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
415
AMP
37
HPAP
9
T1D
Genome assembly (visualization)
404
GRCh38
404
hg19
Lab
411
AMP-T2D consortium
37
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
38
inconsistent ontology term
month_released!
October, 2018
September, 2020
BIOSAMPLE
ASSAY
461 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
278
6
body of pancreas
3
2
pancreas
2
primary cell
pancreatic alpha cell
37
12
pancreatic beta cell
20
12
pancreatic acinar cell
2
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 4 more…
cell line
EndoC_BH1
33
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