Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ATAC-seq
11
snATAC-seq
2
DNase-seq
Assay category
94
DNA accessibility
73
Transcription
51
DNA methylation
44
DNA binding
1
3D chromatin structure
Date released
39
May, 2022
16
May, 2021
13
February, 2023
8
January, 2021
7
August, 2020
3
October, 2019
3
September, 2020
2
June, 2019
2
March, 2019
1
August, 2022
Available data
39
zippedFastqFolder
12
bigWig
11
fastq
3
bam
3
bed broadPeak
2
bed bed3+
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
94
Homo sapiens
Biosample type
49
primary cell
29
tissue
16
cell line
Organ
94
pancreas
90
kidney
73
epithelium
38
heart
36
blood vessel
36
vasculature
35
artery
13
brain
10
lung
8
blood
8
bodily fluid
1
connective tissue
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
49
HPAP
24
AMP
21
T1D
Genome assembly (visualization)
hg19
67
GRCh38
Lab
49
Klaus Kaestner, Upenn
22
AMP-T2D consortium
21
Kyle Gaulton, UCSD
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
16
inconsistent ontology term
1
audit script error
month_released!
October, 2018
assembly!
hg19
BIOSAMPLE
ASSAY
94 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
snATAC-seq
DNase-seq
primary cell
pancreatic alpha cell
29
pancreatic beta cell
16
pancreatic acinar cell
4
tissue
islet of Langerhans
16
7
pancreas
4
body of pancreas
2
cell line
EndoC_BH1
16
Download