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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
Assay category
92
DNA binding
Target of assay
875
histone modification
874
histone
450
transcription factor
448
narrow histone mark
426
broad histone mark
277
control
92
RNA binding protein
89
recombinant protein
33
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
37
November, 2017
21
November, 2018
October, 2018
6
January, 2019
5
May, 2019
5
May, 2024
4
April, 2019
4
August, 2017
4
June, 2019
2
December, 2017
2
December, 2018
1
August, 2021
1
November, 2019
Available data
89
bigWig
88
bed narrowPeak
86
bam
80
bigBed narrowPeak
72
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
92
Homo sapiens
Biosample type
65
cell line
17
tissue
in vitro differentiated cells
10
primary cell
Organ
56
liver
11
heart
10
blood
10
bodily fluid
6
epithelium
5
vasculature
4
blood vessel
3
brain
3
kidney
3
pancreas
1
artery
1
connective tissue
1
eye
Project
92
AMP
Genome assembly (visualization)
83
GRCh38
83
hg19
Lab
86
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
month_released!
October, 2018
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
92 results
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Clear Filters
ChIP-seq
cell line
HepG2
54
GM12878
10
EndoC_BH1
1
tissue
left cardiac atrium
5
heart left ventricle
3
islet of Langerhans
2
ascending aorta
1
coronary artery
1
+ See 5 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
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