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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
total RNA-seq
4
DNase-seq
3
ChIP-seq
Assay category
31
DNA accessibility
3
DNA binding
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
27
February, 2023
7
June, 2019
October, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
bigBed bedMethyl
Organism
34
Homo sapiens
Biosample type
30
tissue
4
primary cell
Organ
593
liver
525
pancreas
355
epithelium
307
heart
266
kidney
203
connective tissue
182
brain
126
vasculature
121
blood vessel
97
bone element
90
adipose tissue
86
musculature of body
69
blood
69
bodily fluid
59
artery
49
limb
34
eye
23
embryo
23
spleen
20
lung
18
ureter
12
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
stomach
1
urinary bladder
1
vein
Project
34
AMP
Genome assembly (visualization)
33
hg19
6
GRCh38
Lab
34
AMP-T2D consortium
month_released!
October, 2019
assay_title!
total RNA-seq
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
34 results
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ATAC-seq
DNase-seq
ChIP-seq
tissue
retina
15
3
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
1
3
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