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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
44
ATAC-seq
11
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
Assay category
46
DNA accessibility
11
DNA binding
2
Transcription
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
35
February, 2023
October, 2019
14
February, 2021
5
May, 2019
2
August, 2021
2
June, 2019
1
July, 2019
Available data
53
bed narrowPeak
22
bam
10
bigWig
6
tagAlign
5
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
tsv
Organism
59
Homo sapiens
Biosample type
45
tissue
14
cell line
Organ
596
liver
525
pancreas
361
epithelium
275
heart
270
kidney
206
connective tissue
184
brain
128
vasculature
122
blood vessel
97
bone element
92
adipose tissue
90
musculature of body
69
blood
69
bodily fluid
59
artery
50
limb
35
eye
25
spleen
23
embryo
20
lung
18
ureter
12
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
stomach
1
urinary bladder
1
vein
Project
59
AMP
Genome assembly (visualization)
53
GRCh38
18
hg19
Lab
59
AMP-T2D consortium
month_released!
October, 2019
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery
36
5
2
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
8
6
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