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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1267
total RNA-seq
1050
ChIP-seq
228
ATAC-seq
199
DNase-seq
100
single cell RNA-seq
18
small RNA-seq
17
WGBS
1
Hi-C
0
Capture-C
Assay category
199
DNA accessibility
Date released
187
June, 2019
9
November, 2018
October, 2019
2
August, 2017
1
November, 2020
Available data
199
bam
199
bed narrowPeak
199
bigBed narrowPeak
199
bigWig
198
bed broadPeak
198
bigBed broadPeak
197
bed bed3+
11
fastq
Organism
199
Homo sapiens
Biosample type
173
tissue
25
primary cell
1
in vitro differentiated cells
Organ
78
kidney
33
musculature of body
32
brain
32
limb
30
heart
18
ureter
14
epithelium
9
connective tissue
7
pancreas
7
vasculature
5
blood vessel
5
liver
4
eye
2
adipose tissue
2
artery
1
spleen
Project
199
AMP
Genome assembly (visualization)
199
GRCh38
180
hg19
Lab
199
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
199 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 38 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 16 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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